Transcription factor genes in TRRUST (12/08/2014).

Gene symbol	Entrez ID	Aliases	Full name
AATF	26574	CHE-1, CHE1, DED	apoptosis antagonizing transcription factor
ABL1	25	ABL, JTK7, bcr/abl, c-ABL, p150, v-abl	c-abl oncogene 1, non-receptor tyrosine kinase
AES	166	AES-1, AES-2, ESP1, GRG, GRG5, TLE5	amino-terminal enhancer of split
AHR	196	bHLHe76	aryl hydrocarbon receptor
AIP	9049	ARA9, FKBP16, FKBP37, SMTPHN, XAP-2, XAP2	aryl hydrocarbon receptor interacting protein
AIRE	326	AIRE1, APECED, APS1, APSI, PGA1	autoimmune regulator
ANKRD1	27063	ALRP, C-193, CARP, CVARP, MCARP, bA320F15.2	ankyrin repeat domain 1 (cardiac muscle)
APBB1	322	FE65, MGC:9072, RIR	amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)
APC	324	BTPS2, DP2, DP2.5, DP3, GS, PPP1R46	adenomatous polyposis coli
APEX1	328	APE, APE1, APEN, APEX, APX, HAP1, REF1	APEX nuclease (multifunctional DNA repair enzyme) 1
AR	367	AIS, DHTR, HUMARA, HYSP1, KD, NR3C4, SBMA, SMAX1, TFM	androgen receptor
ARID1A	8289	B120, BAF250, BAF250a, BM029, C1orf4, ELD, MRD14, OSA1, P270, SMARCF1, hELD, hOSA1	AT rich interactive domain 1A (SWI-like)
ARID1B	57492	6A3-5, BAF250B, BRIGHT, DAN15, ELD/OSA1, MRD12, OSA2, P250R	AT rich interactive domain 1B (SWI1-like)
ARID3A	1820	BRIGHT, DRIL1, DRIL3, E2FBP1	AT rich interactive domain 3A (BRIGHT-like)
ARNT	405	HIF-1-beta, HIF-1beta, HIF1-beta, HIF1B, HIF1BETA, TANGO, bHLHe2	aryl hydrocarbon receptor nuclear translocator
ARNTL	406	BMAL1, BMAL1c, JAP3, MOP3, PASD3, TIC, bHLHe5	aryl hydrocarbon receptor nuclear translocator-like
ARNTL2	56938	BMAL2, CLIF, MOP9, PASD9, bHLHe6	aryl hydrocarbon receptor nuclear translocator-like 2
ARX	170302	CT121, EIEE1, ISSX, MRX29, MRX32, MRX33, MRX36, MRX38, MRX43, MRX54, MRX76, MRX87, MRXS1, PRTS	aristaless related homeobox
ASCL1	429	ASH1, HASH1, MASH1, bHLHa46	achaete-scute complex homolog 1 (Drosophila)
ASH1L	55870	ASH1, ASH1L1, KMT2H	ash1 (absent, small, or homeotic)-like (Drosophila)
ASXL1	171023	BOPS, MDS	additional sex combs like 1 (Drosophila)
ATF1	466	EWS-ATF1, FUS/ATF-1, TREB36	activating transcription factor 1
ATF2	1386	CRE-BP1, CREB2, HB16, TREB7	activating transcription factor 2
ATF3	467	Atf3	activating transcription factor 3
ATF4	468	CREB-2, CREB2, TAXREB67, TXREB	activating transcription factor 4 (tax-responsive enhancer element B67)
ATF5	22809	ATFX, HMFN0395	activating transcription factor 5
ATF6	22926	ATF6A	activating transcription factor 6
ATF7	11016	ATFA	activating transcription factor 7
ATM	472	AT1, ATA, ATC, ATD, ATDC, ATE, TEL1, TELO1	ataxia telangiectasia mutated
ATOH1	474	ATH1, HATH1, MATH-1, bHLHa14	atonal homolog 1 (Drosophila)
ATRX	546	ATR2, JMS, MRXHF1, RAD54, RAD54L, SFM1, SHS, XH2, XNP, ZNF-HX	alpha thalassemia/mental retardation syndrome X-linked
BACH1	571	BACH-1, Bach1	BTB and CNC homology 1, basic leucine zipper transcription factor 1
BACH2	60468	BTBD25	BTB and CNC homology 1, basic leucine zipper transcription factor 2
BARD1	580	0	BRCA1 associated RING domain 1
BARX2	8538	0	BARX homeobox 2
BCL11A	53335	BCL11A-L, BCL11A-S, BCL11A-XL, BCL11a-M, CTIP1, EVI9, HBFQTL5, ZNF856	B-cell CLL/lymphoma 11A (zinc finger protein)
BCL11B	64919	ATL1-alpha, ATL1-beta, ATL1-delta, ATL1-gamma, CTIP-2, CTIP2, RIT1, ZNF856B, hRIT1-alpha	B-cell CLL/lymphoma 11B (zinc finger protein)
BCL3	602	BCL4, D19S37	B-cell CLL/lymphoma 3
BCL6	604	BCL5, BCL6A, LAZ3, ZBTB27, ZNF51	B-cell CLL/lymphoma 6
BDP1	55814	HSA238520, TAF3B1, TFC5, TFIIIB'', TFIIIB150, TFIIIB90, TFNR	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
BHLHE41	79365	BHLHB3, DEC2, SHARP1, hDEC2	basic helix-loop-helix family, member e41
BIN1	274	AMPH2, AMPHL, SH3P9	bridging integrator 1
BPTF	2186	FAC1, FALZ, NURF301	bromodomain PHD finger transcription factor
BRCA1	672	BRCAI, BRCC1, BROVCA1, IRIS, PNCA4, PPP1R53, PSCP, RNF53	breast cancer 1, early onset
BRD7	29117	BP75, CELTIX1, NAG4	bromodomain containing 7
BRIP1	83990	BACH1, FANCJ, OF	BRCA1 interacting protein C-terminal helicase 1
BTAF1	9044	MOT1, TAF(II)170, TAF172, TAFII170	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)
BTF3	689	BETA-NAC, BTF3a, BTF3b, NACB	basic transcription factor 3
BTG2	7832	PC3, TIS21	BTG family, member 2
CBFA2T3	863	ETO2, MTG16, MTGR2, ZMYND4	core-binding factor, runt domain, alpha subunit 2 translocated to, 3
CBFB	865	PEBP2B	core-binding factor, beta subunit
CBX6	23466	0	chromobox homolog 6
CBX7	23492	0	chromobox homolog 7
CBX8	57332	PC3, RC1	chromobox homolog 8
CDCA7L	55536	JPO2, R1, RAM2	cell division cycle associated 7-like
CDX1	1044	0	caudal type homeobox 1
CDX2	1045	CDX-3, CDX3	caudal type homeobox 2
CEBPA	1050	C/EBP-alpha, CEBP, Cebpa	CCAAT/enhancer binding protein (C/EBP), alpha
CEBPB	1051	C/EBP-beta, CRP2, IL6DBP, LAP, NF-IL6, TCF5, Cebpb	CCAAT/enhancer binding protein (C/EBP), beta
CEBPD	1052	C/EBP-delta, CELF, CRP3, NF-IL6-beta, Cebpd	CCAAT/enhancer binding protein (C/EBP), delta
CEBPE	1053	C/EBP-epsilon, CRP1, Cebpe	CCAAT/enhancer binding protein (C/EBP), epsilon
CEBPG	1054	GPE1BP, IG/EBP-1, Cebpg	CCAAT/enhancer binding protein (C/EBP), gamma
CEBPZ	10153	CBF, CBF2, HSP-CBF, NOC1	CCAAT/enhancer binding protein (C/EBP), zeta
CHD4	1108	Mi-2b, Mi2-BETA	chromodomain helicase DNA binding protein 4
CHD8	57680	AUTS18, HELSNF1	chromodomain helicase DNA binding protein 8
CIITA	4261	C2TA, CIITAIV, MHC2TA, NLRA	class II, major histocompatibility complex, transactivator
CITED2	10370	ASD8, MRG-1, MRG1, P35SRJ, VSD2	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
CLOCK	9575	KAT13D, bHLHe8	clock circadian regulator
CNBP	7555	CNBP1, DM2, PROMM, RNF163, ZCCHC22, ZNF9	CCHC-type zinc finger, nucleic acid binding protein
CNOT7	29883	CAF1, hCAF-1	CCR4-NOT transcription complex, subunit 7
CNOT8	9337	CAF1, CALIF, POP2, hCAF1	CCR4-NOT transcription complex, subunit 8
COPS5	10987	CSN5, JAB1, MOV-34, SGN5	COP9 signalosome subunit 5
CRABP2	1382	CRABP-II, RBP6	cellular retinoic acid binding protein 2
CREB1	1385	CREB, Creb1	cAMP responsive element binding protein 1
CREB3	10488	LUMAN, LZIP	cAMP responsive element binding protein 3
CREB3L1	90993	OASIS	cAMP responsive element binding protein 3-like 1
CREB5	9586	CRE-BPA	cAMP responsive element binding protein 5
CREBBP	1387	CBP, KAT3A, RSTS	CREB binding protein
CREM	1390	CREM-2, ICER, hCREM-2	cAMP responsive element modulator
CRTC1	23373	MECT1, TORC-1, TORC1, WAMTP1	CREB regulated transcription coactivator 1
CRX	1406	CORD2, CRD, LCA7, OTX3	cone-rod homeobox
CTBP1	1487	BARS	C-terminal binding protein 1
CTCF	10664	0	CCCTC-binding factor (zinc finger protein)
CTCFL	140690	BORIS, CT27, CTCF-T, HMGB1L1, dJ579F20.2	CCCTC-binding factor (zinc finger protein)-like
CTNNB1	1499	CTNNB, MRD19, armadillo	catenin (cadherin-associated protein), beta 1, 88kDa
CTNNBIP1	56998	ICAT	catenin, beta interacting protein 1
CUX1	1523	CASP, CDP, CDP/Cut, CDP1, COY1, CUTL1, CUX, Clox, Cux/CDP, GOLIM6, Nbla10317, p100, p110, p200, p75	cut-like homeobox 1
DACH1	1602	DACH	dachshund homolog 1 (Drosophila)
DBP	1628	DABP	D site of albumin promoter (albumin D-box) binding protein
DDB2	1643	DDBB, UV-DDB2	damage-specific DNA binding protein 2, 48kDa
DDIT3	1649	CEBPZ, CHOP, CHOP-10, CHOP10, GADD153	DNA-damage-inducible transcript 3
DEAF1	10522	NUDR, SPN, ZMYND5	DEAF1 transcription factor
DEK	7913	D6S231E	DEK oncogene
DLX3	1747	AI4, TDO	distal-less homeobox 3
DLX4	1748	BP1, DLX7, DLX8, DLX9	distal-less homeobox 4
DLX5	1749	SHFM1D	distal-less homeobox 5
DNMT1	1786	AIM, CXXC9, DNMT, HSN1E, MCMT	DNA (cytosine-5-)-methyltransferase 1
DNMT3A	1788	DNMT3A2, M.HsaIIIA	DNA (cytosine-5-)-methyltransferase 3 alpha
DNMT3L	29947	0	DNA (cytosine-5-)-methyltransferase 3-like
DR1	1810	NC2, NC2-BETA	down-regulator of transcription 1, TBP-binding (negative cofactor 2)
E2F1	1869	E2F-1, RBAP1, RBBP3, RBP3	E2F transcription factor 1
E2F2	1870	E2F-2	E2F transcription factor 2
E2F3	1871	E2F-3	E2F transcription factor 3
E2F4	1874	E2F-4	E2F transcription factor 4, p107/p130-binding
E2F5	1875	E2F-5	E2F transcription factor 5, p130-binding
E2F6	1876	E2F-6	E2F transcription factor 6
E2F7	144455	0	E2F transcription factor 7
E2F8	79733	E2F-8	E2F transcription factor 8
E4F1	1877	E4F	E4F transcription factor 1
EAPP	55837	BM036, C14orf11	E2F-associated phosphoprotein
EBF1	1879	COE1, EBF, O/E-1, OLF1	early B-cell factor 1
ECD	11319	GCR2, HSGT1	ecdysoneless homolog (Drosophila)
EGR1	1958	AT225, G0S30, KROX-24, NGFI-A, TIS8, ZIF-268, ZNF225, Egr1	early growth response 1
EGR2	1959	AT591, CMT1D, CMT4E, KROX20	early growth response 2
EGR3	1960	EGR-3, PILOT	early growth response 3
EHF	26298	ESE3, ESE3B, ESEJ	ets homologous factor
EHMT2	10919	BAT8, C6orf30, G9A, GAT8, KMT1C, NG36	euchromatic histone-lysine N-methyltransferase 2
EIF2AK2	5610	EIF2AK1, PKR, PRKR	eukaryotic translation initiation factor 2-alpha kinase 2
ELF1	1997	0	E74-like factor 1 (ets domain transcription factor)
ELF2	1998	EU32, NERF, NERF-1A, NERF-1B, NERF-1a,b, NERF-2	E74-like factor 2 (ets domain transcription factor)
ELF3	1999	EPR-1, ERT, ESE-1, ESX	E74-like factor 3 (ets domain transcription factor, epithelial-specific )
ELF4	2000	ELFR, MEF	E74-like factor 4 (ets domain transcription factor)
ELK1	2002	Elk1	ELK1, member of ETS oncogene family
ELK3	2004	ERP, NET, SAP2	ELK3, ETS-domain protein (SRF accessory protein 2)
ELK4	2005	SAP1	ELK4, ETS-domain protein (SRF accessory protein 1)
ELL	8178	C19orf17, ELL1, MEN, PPP1R68	elongation factor RNA polymerase II
EN1	2019	0	engrailed homeobox 1
ENO1	2023	ENO1L1, MPB1, NNE, PPH	enolase 1, (alpha)
EOMES	8320	TBR2	eomesodermin
EP300	2033	KAT3B, RSTS2, p300	E1A binding protein p300
EPAS1	2034	ECYT4, HIF2A, HLF, MOP2, PASD2, bHLHe73	endothelial PAS domain protein 1
ERCC2	2068	COFS2, EM9, TTD, XPD	excision repair cross-complementing rodent repair deficiency, complementation group 2
ERCC3	2071	BTF2, GTF2H, RAD25, TFIIH, XPB	excision repair cross-complementing rodent repair deficiency, complementation group 3
ERF	2077	PE-2, PE2	Ets2 repressor factor
ERG	2078	erg-3, p55	v-ets erythroblastosis virus E26 oncogene homolog (avian)
ESR1	2099	ER, ESR, ESRA, Era, NR3A1	estrogen receptor 1
ESR2	2100	ER-BETA, ESR-BETA, ESRB, ESTRB, Erb, NR3A2	estrogen receptor 2 (ER beta)
ESRRA	2101	ERR1, ERRa, ERRalpha, ESRL1, NR3B1, ERRA	estrogen-related receptor alpha
ESRRG	2104	ERR3, ERRgamma, NR3B3	estrogen-related receptor gamma
ETS1	2113	ETS-1, EWSR2, Ets1	v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)
ETS2	2114	ETS2IT1, Ets2	v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)
ETV1	2115	ER81	ets variant 1
ETV2	2116	ER71, ETSRP71	ets variant 2
ETV3	2117	METS, PE-1, PE1, bA110J1.4	ets variant 3
ETV4	2118	E1A-F, E1AF, PEA3, PEAS3	ets variant 4
ETV5	2119	ERM	ets variant 5
ETV6	2120	TEL, TEL/ABL	ets variant 6
EVX1	2128	0	even-skipped homeobox 1
EWSR1	2130	EWS, bK984G1.4	Ewing sarcoma breakpoint region 1
EZH2	2146	ENX-1, ENX1, EZH1, KMT6, KMT6A, WVS2	enhancer of zeste homolog 2 (Drosophila)
FHL2	2274	AAG11, DRAL, FHL-2, SLIM-3, SLIM3	four and a half LIM domains 2
FLI1	2313	EWSR2, SIC-1	Friend leukemia virus integration 1
FOS	2353	AP-1, C-FOS, p55, Fos, c-Fos	FBJ murine osteosarcoma viral oncogene homolog
FOSB	2354	AP-1, G0S3, GOS3, GOSB	FBJ murine osteosarcoma viral oncogene homolog B
FOSL1	8061	FRA, FRA1, fra-1	FOS-like antigen 1
FOSL2	2355	FRA2	FOS-like antigen 2
FOXA1	3169	HNF3A, TCF3A	forkhead box A1
FOXA2	3170	HNF3B, TCF3B	forkhead box A2
FOXA3	3171	FKHH3, HNF3G, TCF3G	forkhead box A3
FOXC1	2296	ARA, FKHL7, FREAC-3, FREAC3, IGDA, IHG1, IRID1, RIEG3	forkhead box C1
FOXD3	27022	AIS1, Genesis, HFH2, VAMAS2	forkhead box D3
FOXE1	2304	FKHL15, FOXE2, HFKH4, HFKL5, TITF2, TTF-2, TTF2	forkhead box E1 (thyroid transcription factor 2)
FOXF1	2294	ACDMPV, FKHL5, FREAC1	forkhead box F1
FOXF2	2295	FKHL6, FREAC-2, FREAC2	forkhead box F2
FOXG1	2290	BF1, BF2, FHKL3, FKH2, FKHL1, FKHL2, FKHL3, FKHL4, FOXG1A, FOXG1B, FOXG1C, HBF-1, HBF-2, HBF-3, HBF-G2, HBF2, HFK1, HFK2, HFK3, KHL2, QIN	forkhead box G1
FOXH1	8928	FAST-1, FAST1	forkhead box H1
FOXJ1	2302	FKHL13, HFH-4, HFH4	forkhead box J1
FOXK2	3607	ILF, ILF-1, ILF1	forkhead box K2
FOXL1	2300	FKH6, FKHL11, FREAC7	forkhead box L1
FOXL2	668	BPES, BPES1, PFRK, PINTO, POF3	forkhead box L2
FOXM1	2305	FKHL16, FOXM1B, HFH-11, HFH11, HNF-3, INS-1, MPHOSPH2, MPP-2, MPP2, PIG29, TGT3, TRIDENT	forkhead box M1
FOXN1	8456	FKHL20, RONU, WHN	forkhead box N1
FOXN4	121643	0	forkhead box N4
FOXO1	2308	FKH1, FKHR, FOXO1A	forkhead box O1
FOXO3	2309	AF6q21, FKHRL1, FKHRL1P2, FOXO2, FOXO3A	forkhead box O3
FOXO4	4303	AFX, AFX1, MLLT7	forkhead box O4
FOXP1	27086	12CC4, QRF1, hFKH1B	forkhead box P1
FOXP2	93986	CAGH44, SPCH1, TNRC10	forkhead box P2
FOXP3	50943	AIID, DIETER, IPEX, PIDX, XPID	forkhead box P3
FOXQ1	94234	HFH1	forkhead box Q1
FUBP1	8880	FBP, FUBP	far upstream element (FUSE) binding protein 1
FUBP3	8939	FBP3	far upstream element (FUSE) binding protein 3
FUS	2521	ALS6, ETM4, FUS1, HNRNPP2, POMP75, TLS	fused in sarcoma
GABPA	2551	E4TF1-60, E4TF1A, NFT2, NRF2, NRF2A, RCH04A07	GA binding protein transcription factor, alpha subunit 60kDa
GABPB1	2553	BABPB2, E4TF1, E4TF1-47, E4TF1-53, E4TF1B, GABPB, GABPB2, NRF2B1, NRF2B2	GA binding protein transcription factor, beta subunit 1
GABPB2	126626	0	GA binding protein transcription factor, beta subunit 2
GATA1	2623	ERYF1, GATA-1, GF-1, GF1, NFE1, XLANP, XLTDA, XLTT	GATA binding protein 1 (globin transcription factor 1)
GATA2	2624	DCML, MONOMAC, NFE1B, GATA-2	GATA binding protein 2
GATA3	2625	HDR, HDRS	GATA binding protein 3
GATA4	2626	ASD2, VSD1	GATA binding protein 4
GATA5	140628	bB379O24.1	GATA binding protein 5
GATA6	2627	0	GATA binding protein 6
GBX2	2637	0	gastrulation brain homeobox 2
GCM1	8521	GCMA, hGCMa	glial cells missing homolog 1 (Drosophila)
GCM2	9247	GCMB, hGCMb	glial cells missing homolog 2 (Drosophila)
GFI1	2672	GFI-1, GFI1A, SCN2, ZNF163	growth factor independent 1 transcription repressor
GFI1B	8328	0	growth factor independent 1B transcription repressor
GLI1	2735	GLI	GLI family zinc finger 1
GLI2	2736	HPE9, THP1, THP2	GLI family zinc finger 2
GLI3	2737	ACLS, GCPS, GLI3-190, GLI3FL, PAP-A, PAPA, PAPA1, PAPB, PHS, PPDIV	GLI family zinc finger 3
GLIS3	169792	ZNF515	GLIS family zinc finger 3
GRHL1	29841	LBP32, MGR, NH32, TFCP2L2	grainyhead-like 1 (Drosophila)
GSC	145258	0	goosecoid homeobox
GTF2B	2959	TF2B, TFIIB	general transcription factor IIB
GTF2F1	2962	BTF4, RAP74, TF2F1, TFIIF	general transcription factor IIF, polypeptide 1, 74kDa
GTF2I	2969	BAP135, BTKAP1, DIWS, GTFII-I, IB291, SPIN, TFII-I, WBS, WBSCR6	general transcription factor IIi
GTF3A	2971	AP2, TFIIIA	general transcription factor IIIA
GZF1	64412	ZBTB23, ZNF336	GDNF-inducible zinc finger protein 1
HAND2	9464	DHAND2, Hed, Thing2, bHLHa26, dHand	heart and neural crest derivatives expressed 2
HAX1	10456	HCLSBP1, HS1BP1, SCN3	HCLS1 associated protein X-1
HBP1	26959	0	HMG-box transcription factor 1
HCFC1	3054	CFF, HCF-1, HCF1, HFC1, MRX3, VCAF	host cell factor C1 (VP16-accessory protein)
HDAC1	3065	GON-10, HD1, RPD3, RPD3L1	histone deacetylase 1
HDAC10	83933	HD10	histone deacetylase 10
HDAC11	79885	HD11	histone deacetylase 11
HDAC2	3066	HD2, RPD3, YAF1	histone deacetylase 2
HDAC3	8841	HD3, RPD3, RPD3-2	histone deacetylase 3
HDAC4	9759	AHO3, BDMR, HA6116, HD4, HDAC-4, HDAC-A, HDACA	histone deacetylase 4
HDAC5	10014	HD5, NY-CO-9	histone deacetylase 5
HDAC7	51564	HD7A, HDAC7A	histone deacetylase 7
HDAC9	9734	HD7, HD7b, HD9, HDAC, HDAC7, HDAC7B, HDAC9B, HDAC9FL, HDRP, MITR	histone deacetylase 9
HDGF	3068	HMG1L2	hepatoma-derived growth factor
HES1	3280	HES-1, HHL, HRY, bHLHb39	hairy and enhancer of split 1, (Drosophila)
HES6	55502	HES-6, bHLHb41, bHLHc23	hairy and enhancer of split 6 (Drosophila)
HEXIM1	10614	CLP1, EDG1, HIS1, MAQ1	hexamethylene bis-acetamide inducible 1
HEY1	23462	BHLHb31, CHF2, HERP2, HESR1, HRT-1, OAF1	hairy/enhancer-of-split related with YRPW motif 1
HEY2	23493	CHF1, GRIDLOCK, GRL, HERP1, HESR2, HRT2, bHLHb32	hairy/enhancer-of-split related with YRPW motif 2
HHEX	3087	HEX, HMPH, HOX11L-PEN, PRH, PRHX	hematopoietically expressed homeobox
HIC1	3090	ZBTB29, ZNF901, hic-1	hypermethylated in cancer 1
HIF1A	3091	HIF-1A, HIF-1alpha, HIF1, HIF1-ALPHA, MOP1, PASD8, bHLHe78	hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HIF3A	64344	HIF-3A, IPAS, MOP7, PASD7, bHLHe17	hypoxia inducible factor 3, alpha subunit
HINFP	25988	HiNF-P, MIZF, ZNF743	histone H4 transcription factor
HIPK2	28996	PRO0593	homeodomain interacting protein kinase 2
HIRA	7290	DGCR1, TUP1, TUPLE1	HIR histone cell cycle regulation defective homolog A (S. cerevisiae)
HIVEP2	3097	HIV-EP2, MBP-2, MIBP1, SHN2, ZAS2, ZNF40B	human immunodeficiency virus type I enhancer binding protein 2
HLF	3131	0	hepatic leukemia factor
HLTF	6596	HIP116, HIP116A, HLTF1, RNF80, SMARCA3, SNF2L3, ZBU1	helicase-like transcription factor
HLX	3142	HB24, HLX1	H2.0-like homeobox
HMGA1	3159	HMG-R, HMGA1A, HMGIY	high mobility group AT-hook 1
HMGA2	8091	BABL, HMGI-C, HMGIC, LIPO, STQTL9	high mobility group AT-hook 2
HMGB2	3148	HMG2	high mobility group box 2
HMGN1	3150	HMG14	high mobility group nucleosome binding domain 1
HMGN3	9324	PNAS-25, TRIP7	high mobility group nucleosomal binding domain 3
HNF1A	6927	HNF-1A, HNF1, IDDM20, LFB1, MODY3, TCF-1, TCF1	HNF1 homeobox A
HNF4A	3172	HNF4, HNF4a7, HNF4a8, HNF4a9, HNF4alpha, MODY, MODY1, NR2A1, NR2A21, TCF, TCF14	hepatocyte nuclear factor 4, alpha
HNF4G	3174	NR2A2, NR2A3	hepatocyte nuclear factor 4, gamma
HNRNPD	3184	AUF1, AUF1A, HNRPD, P37, hnRNPD0	heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
HOPX	84525	CAMEO, HOD, HOP, LAGY, NECC1, OB1, SMAP31, TOTO	HOP homeobox
HOXA1	3198	BSAS, HOX1, HOX1F	homeobox A1
HOXA10	3206	HOX1, HOX1.8, HOX1H, PL	homeobox A10
HOXA11	3207	HOX1, HOX1I	homeobox A11
HOXA4	3201	HOX1, HOX1D	homeobox A4
HOXA5	3202	HOX1, HOX1.3, HOX1C	homeobox A5
HOXA7	3204	ANTP, HOX1, HOX1.1, HOX1A	homeobox A7
HOXA9	3205	ABD-B, HOX1, HOX1.7, HOX1G	homeobox A9
HOXB1	3211	HCFP3, HOX2, HOX2I, Hox-2.9	homeobox B1
HOXB13	10481	PSGD	homeobox B13
HOXB4	3214	HOX-2.6, HOX2, HOX2F	homeobox B4
HOXB7	3217	HHO.C1, HOX2, HOX2C, Hox-2.3	homeobox B7
HOXC10	3226	HOX3I	homeobox C10
HOXC11	3227	HOX3H	homeobox C11
HOXC13	3229	ECTD9, HOX3, HOX3G	homeobox C13
HOXC6	3223	CP25, HHO.C8, HOX3, HOX3C	homeobox C6
HOXC8	3224	HOX3, HOX3A	homeobox C8
HOXC9	3225	HOX3, HOX3B	homeobox C9
HOXD1	3231	HOX4, HOX4G, Hox-4.7	homeobox D1
HOXD13	3239	BDE, BDSD, HOX4I, SPD	homeobox D13
HOXD3	3232	HOX1D, HOX4, HOX4A, Hox-4.1	homeobox D3
HOXD9	3235	HOX4, HOX4C, Hox-4.3, Hox-5.2, Hoxd9	homeobox D9
HR	55806	ALUNC, AU, HSA277165, MUHH, MUHH1	hair growth associated
HSF1	3297	HSTF1	heat shock transcription factor 1
HSF2	3298	HSF 2, HSTF 2	heat shock transcription factor 2
HSF4	3299	CTM	heat shock transcription factor 4
HTATIP2	10553	CC3, SDR44U1, TIP30	HIV-1 Tat interactive protein 2, 30kDa
ID1	3397	ID, bHLHb24	inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
ID2	3398	GIG8, ID2A, ID2H, bHLHb26	inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
ID3	3399	HEIR-1, bHLHb25	inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
ID4	3400	IDB4, bHLHb27	inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
IFI16	3428	IFNGIP1, PYHIN2	interferon, gamma-inducible protein 16
IKBKB	3551	IKK-beta, IKK2, IKKB, NFKBIKB	inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
IKZF1	10320	Hs.54452, IK1, IKAROS, LYF1, PRO0758, ZNFN1A1, hIk-1	IKAROS family zinc finger 1 (Ikaros)
ILF2	3608	NF45, PRO3063	interleukin enhancer binding factor 2
ILF3	3609	CBTF, DRBF, DRBP76, MMP4, MPHOSPH4, MPP4, NF-AT-90, NF110, NF110b, NF90, NF90a, NF90b, NFAR, NFAR-1, NFAR2, TCP110, TCP80	interleukin enhancer binding factor 3, 90kDa
ING1	3621	p24ING1c, p33, p33ING1, p33ING1b, p47, p47ING1a	inhibitor of growth family, member 1
ING2	3622	ING1L, p33ING2	inhibitor of growth family, member 2
ING4	51147	my036, p29ING4	inhibitor of growth family, member 4
IRF1	3659	IRF-1, MAR	interferon regulatory factor 1
IRF2	3660	IRF-2	interferon regulatory factor 2
IRF3	3661	0	interferon regulatory factor 3
IRF4	3662	LSIRF, MUM1, NF-EM5	interferon regulatory factor 4
IRF5	3663	SLEB10	interferon regulatory factor 5
IRF6	3664	LPS, OFC6, PIT, PPS, PPS1, VWS, VWS1	interferon regulatory factor 6
IRF7	3665	IRF-7H, IRF7A, IRF7B, IRF7C, IRF7H	interferon regulatory factor 7
IRF8	3394	H-ICSBP, ICSBP, ICSBP1, IRF-8	interferon regulatory factor 8
IRF9	10379	IRF-9, ISGF3, ISGF3G, p48	interferon regulatory factor 9
ISL1	3670	ISLET1, Isl-1	ISL LIM homeobox 1
JARID2	3720	JMJ	jumonji, AT rich interactive domain 2
JDP2	122953	JUNDM2	Jun dimerization protein 2
JUN	3725	AP-1, AP1, c-Jun, Jun	jun proto-oncogene
JUNB	3726	AP-1, Junb	jun B proto-oncogene
JUND	3727	AP-1, Jund, JunD	jun D proto-oncogene
KAT2B	8850	CAF, P, P/CAF, PCAF	K(lysine) acetyltransferase 2B
KAT5	10524	ESA1, HTATIP, HTATIP1, PLIP, TIP, TIP60, ZC2HC5, cPLA2	K(lysine) acetyltransferase 5
KAT6A	7994	MOZ, MYST3, RUNXBP2, ZC2HC6A, ZNF220	K(lysine) acetyltransferase 6A
KCNIP3	30818	CSEN, DREAM, KCHIP3	Kv channel interacting protein 3, calsenilin
KDM2A	22992	CXXC8, FBL11, FBL7, FBXL11, JHDM1A, LILINA	lysine (K)-specific demethylase 2A
KDM4B	23030	JMJD2B, TDRD14B	lysine (K)-specific demethylase 4B
KDM4C	23081	GASC1, JHDM3C, JMJD2C, TDRD14C, bA146B14.1	lysine (K)-specific demethylase 4C
KHDRBS1	10657	Sam68, p62, p68	KH domain containing, RNA binding, signal transduction associated 1
KHSRP	8570	FBP2, FUBP2, KSRP	KH-type splicing regulatory protein
KLF1	10661	EKLF, HBFQTL6, INLU	Kruppel-like factor 1 (erythroid)
KLF10	7071	EGRA, TIEG, TIEG1	Kruppel-like factor 10
KLF11	8462	FKLF, FKLF1, MODY7, TIEG2, Tieg3	Kruppel-like factor 11
KLF12	11278	AP-2rep, AP2REP	Kruppel-like factor 12
KLF13	51621	BTEB3, FKLF2, NSLP1, RFLAT-1, RFLAT1	Kruppel-like factor 13
KLF15	28999	KKLF	Kruppel-like factor 15
KLF16	83855	BTEB4, DRRF, NSLP2	Kruppel-like factor 16
KLF2	10365	LKLF	Kruppel-like factor 2 (lung)
KLF3	51274	BKLF	Kruppel-like factor 3 (basic)
KLF4	9314	EZF, GKLF	Kruppel-like factor 4 (gut)
KLF5	688	BTEB2, CKLF, IKLF	Kruppel-like factor 5 (intestinal)
KLF6	1316	BCD1, CBA1, COPEB, CPBP, GBF, PAC1, ST12, ZF9	Kruppel-like factor 6
KLF7	8609	UKLF	Kruppel-like factor 7 (ubiquitous)
KLF8	11279	BKLF3, ZNF741	Kruppel-like factor 8
KLF9	687	BTEB, BTEB1	Kruppel-like factor 9
L3MBTL1	26013	H-L(3)MBT, L3MBTL, ZC2HC3, dJ138B7.3	l(3)mbt-like 1 (Drosophila)
LCOR	84458	MLR2	ligand dependent nuclear receptor corepressor
LDB1	8861	CLIM2, NLI	LIM domain binding 1
LEF1	51176	LEF-1, TCF10, TCF1ALPHA, TCF7L3	lymphoid enhancer-binding factor 1
LHX2	9355	LH2, hLhx2	LIM homeobox 2
LHX3	8022	CPHD3, LIM3, M2-LHX3	LIM homeobox 3
LHX4	89884	CPHD4	LIM homeobox 4
LIMD1	8994	0	LIM domains containing 1
LIN28A	79727	CSDD1, LIN-28, LIN28, ZCCHC1, lin-28A	lin-28 homolog A (C. elegans)
LMO2	4005	RBTN2, RBTNL1, RHOM2, TTG2	LIM domain only 2 (rhombotin-like 1)
LMO3	55885	RBTN3, RBTNL2, RHOM3, Rhom-3	LIM domain only 3 (rhombotin-like 2)
LMO4	8543	0	LIM domain only 4
LMX1B	4010	LMX1.2, NPS1	LIM homeobox transcription factor 1, beta
LRRFIP1	9208	FLAP-1, FLAP1, FLIIAP1, GCF-2, GCF2, HUFI-1, TRIP	leucine rich repeat (in FLII) interacting protein 1
LYL1	4066	bHLHa18	lymphoblastic leukemia derived sequence 1
MAF	4094	CCA4, c-MAF	v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)
MAFA	389692	RIPE3b1, hMafA	v-maf musculoaponeurotic fibrosarcoma oncogene homolog A (avian)
MAFB	9935	KRML, MCTO	v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)
MAFF	23764	U-MAF, hMafF, MafF	v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
MAFG	4097	hMAF	v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)
MAFK	7975	NFE2U, P18, MafK	v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian)
MAML1	9794	Mam-1, Mam1	mastermind-like 1 (Drosophila)
MAX	4149	bHLHd4, Max	MYC associated factor X
MAZ	4150	PUR1, Pur-1, SAF-1, SAF-2, SAF-3, ZF87, ZNF801, Zif87	MYC-associated zinc finger protein (purine-binding transcription factor)
MBD1	4152	CXXC3, PCM1, RFT	methyl-CpG binding domain protein 1
MBD2	8932	DMTase, NY-CO-41	methyl-CpG binding domain protein 2
MCM2	4171	BM28, CCNL1, CDCL1, D3S3194, MITOTIN, cdc19	minichromosome maintenance complex component 2
MCM4	4173	CDC21, CDC54, NKCD, NKGCD, P1-CDC21, hCdc21	minichromosome maintenance complex component 4
MCM6	4175	MCG40308, Mis5, P105MCM	minichromosome maintenance complex component 6
MDM4	4194	HDMX, MDMX, MRP1	Mdm4 p53 binding protein homolog (mouse)
MECP2	4204	AUTSX3, MRX16, MRX79, MRXS13, MRXSL, PPMX, RS, RTS, RTT	methyl CpG binding protein 2 (Rett syndrome)
MED1	5469	CRSP1, CRSP200, DRIP205, DRIP230, PBP, PPARBP, PPARGBP, RB18A, TRAP220, TRIP2	mediator complex subunit 1
MED15	51586	ARC105, CAG7A, CTG7A, PCQAP, TIG-1, TIG1, TNRC7	mediator complex subunit 15
MED23	9439	ARC130, CRSP130, CRSP133, CRSP3, DRIP130, MRT18, SUR-2, SUR2	mediator complex subunit 23
MEF2A	4205	ADCAD1, RSRFC4, RSRFC9, mef2	myocyte enhancer factor 2A
MEF2C	4208	C5DELq14.3, DEL5q14.3	myocyte enhancer factor 2C
MEF2D	4209	0	myocyte enhancer factor 2D
MEIS1	4211	0	Meis homeobox 1
MEN1	4221	MEAI, SCG2	multiple endocrine neoplasia I
MITF	4286	CMM8, MI, WS2, WS2A, bHLHe32	microphthalmia-associated transcription factor
MKL1	57591	BSAC, MAL, MRTF-A	megakaryoblastic leukemia (translocation) 1
MLL2	8085	AAD10, ALR, CAGL114, KABUK1, KMS, KMT2D, MLL4, TNRC21	myeloid/lymphoid or mixed-lineage leukemia 2
MLL3	58508	HALR, KMT2C	myeloid/lymphoid or mixed-lineage leukemia 3
MLL4	9757	HRX2, KMT2B, MLL2, TRX2, WBP7	myeloid/lymphoid or mixed-lineage leukemia 4
MLLT10	8028	AF10	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila) translocated to, 10
MLLT3	4300	AF9, YEATS3	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila) translocated to, 3
MLX	6945	MAD7, MXD7, TCFL4, bHLHd13	MLX, MAX dimerization protein
MLXIPL	51085	CHREBP, MIO, MONDOB, WBSCR14, WS-bHLH, bHLHd14	MLX interacting protein-like
MSC	9242	ABF-1, ABF1, MYOR, bHLHa22	musculin
MSX1	4487	ECTD3, HOX7, HYD1, STHAG1	msh homeobox 1
MSX2	4488	CRS2, FPP, HOX8, MSH, PFM, PFM1	msh homeobox 2
MTA1	9112	0	metastasis associated 1
MTA2	9219	MTA1L1, PID	metastasis associated 1 family, member 2
MTA3	57504	0	metastasis associated 1 family, member 3
MTF1	4520	MTF-1, ZRF	metal-regulatory transcription factor 1
MXD1	4084	BHLHC58, MAD, MAD1	MAX dimerization protein 1
MXD4	10608	MAD4, MST149, MSTP149, bHLHc12	MAX dimerization protein 4
MXI1	4601	MAD2, MXD2, MXI, bHLHc11, Mxi1	MAX interactor 1, dimerization protein
MYB	4602	Cmyb, c-myb, c-myb_CDS, efg, Myb	v-myb myeloblastosis viral oncogene homolog (avian)
MYBBP1A	10514	P160, PAP2	MYB binding protein (P160) 1a
MYBL1	4603	A-MYB, AMYB	v-myb myeloblastosis viral oncogene homolog (avian)-like 1
MYBL2	4605	B-MYB, BMYB	v-myb myeloblastosis viral oncogene homolog (avian)-like 2
MYC	4609	MRTL, bHLHe39, c-Myc, c-Myc	v-myc myelocytomatosis viral oncogene homolog (avian)
MYCN	4613	MODED, N-myc, NMYC, ODED, bHLHe37	v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
MYF5	4617	bHLHc2	myogenic factor 5
MYF6	4618	CNM3, MRF4, bHLHc4, myf-6	myogenic factor 6 (herculin)
MYOCD	93649	MYCD	myocardin
MYOD1	4654	MYF3, MYOD, PUM, bHLHc1	myogenic differentiation 1
MYOG	4656	MYF4, bHLHc3, myf-4	myogenin (myogenic factor 4)
MZF1	7593	MZF-1, MZF1B, ZFP98, ZNF42, ZSCAN6	myeloid zinc finger 1
NAB1	4664	0	NGFI-A binding protein 1 (EGR1 binding protein 1)
NAB2	4665	MADER	NGFI-A binding protein 2 (EGR1 binding protein 2)
NANOG	79923	0	Nanog homeobox
NCOA1	8648	F-SRC-1, KAT13A, RIP160, SRC1, bHLHe42, bHLHe74	nuclear receptor coactivator 1
NCOA2	10499	GRIP1, KAT13C, NCoA-2, SRC2, TIF2, bHLHe75	nuclear receptor coactivator 2
NCOA3	8202	ACTR, AIB-1, AIB1, CAGH16, CTG26, KAT13B, RAC3, SRC-3, SRC3, TNRC14, TNRC16, TRAM-1, bHLHe42, pCIP	nuclear receptor coactivator 3
NCOA4	8031	ARA70, ELE1, PTC3, RFG	nuclear receptor coactivator 4
NCOA6	23054	AIB3, ASC2, NRC, PRIP, RAP250, TRBP	nuclear receptor coactivator 6
NCOR1	9611	N-CoR, N-CoR1, TRAC1, hN-CoR	nuclear receptor corepressor 1
NCOR2	9612	CTG26, N-CoR2, SMAP270, SMRT, SMRTE, SMRTE-tau, TNRC14, TRAC, TRAC-1, TRAC1	nuclear receptor corepressor 2
NELFB	25920	COBRA1, NELF-B	negative elongation factor complex member B
NELFCD	51497	NELF-C, NELF-D, TH1, TH1L	negative elongation factor complex member C/D
NEUROD1	4760	BETA2, BHF-1, MODY6, NEUROD, bHLHa3	neuronal differentiation 1
NEUROG3	50674	Atoh5, Math4B, NGN-3, bHLHa7, ngn3	neurogenin 3
NF1	4763	NFNS, VRNF, WSS	neurofibromin 1
NFAT5	10725	NF-AT5, NFATL1, NFATZ, OREBP, TONEBP	nuclear factor of activated T-cells 5, tonicity-responsive
NFATC1	4772	NF-ATC, NFAT2, NFATc	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
NFATC2	4773	NFAT1, NFATP	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
NFATC3	4775	NFAT4, NFATX	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
NFATC4	4776	NF-ATc4, NFAT3	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4
NFE2	4778	NF-E2, p45	nuclear factor (erythroid-derived 2), 45kDa
NFE2L1	4779	LCR-F1, NRF1, TCF11	nuclear factor (erythroid-derived 2)-like 1
NFE2L2	4780	NRF2	nuclear factor (erythroid-derived 2)-like 2
NFIA	4774	CTF, NF-I/A, NF1-A, NFI-A, NFI-L, Nfia	nuclear factor I/A
NFIB	4781	CTF, HMGIC/NFIB, NF-I/B, NF1-B, NFI-B, NFI-RED, NFIB2, NFIB3	nuclear factor I/B
NFIC	4782	CTF, CTF5, NF-I, NFI	nuclear factor I/C (CCAAT-binding transcription factor)
NFIL3	4783	E4BP4, IL3BP1, NF-IL3A, NFIL3A	nuclear factor, interleukin 3 regulated
NFIX	4784	MRSHSS, NF1A, SOTOS2	nuclear factor I/X (CCAAT-binding transcription factor)
NFKB1	4790	EBP-1, KBF1, NF-kB1, NF-kappa-B, NF-kappaB, NFKB-p105, NFKB-p50, NFkappaB, p105, p50, Nfkb1, NFKB	nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NFKB2	4791	H2TF1, LYT-10, LYT10, NF-kB2, p105, p52, NF-KB2	nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)
NFKBIA	4792	IKBA, MAD-3, NFKBI	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
NFKBIB	4793	IKBB, TRIP9	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta
NFKBIZ	64332	IKBZ, INAP, MAIL	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
NFRKB	4798	INO80G	nuclear factor related to kappaB binding protein
NFYA	4800	CBF-A, CBF-B, HAP2, NF-YA	nuclear transcription factor Y, alpha
NFYB	4801	CBF-A, CBF-B, HAP3, NF-YB	nuclear transcription factor Y, beta
NFYC	4802	CBF-C, CBFC, H1TF2A, HAP5, HSM, NF-YC	nuclear transcription factor Y, gamma
NHLH2	4808	HEN2, NSCL2, bHLHa34	nescient helix loop helix 2
NKX2-1	7080	BCH, BHC, NK-2, NKX2.1, NKX2A, TEBP, TITF1, TTF-1, TTF1	NK2 homeobox 1
NKX2-2	4821	NKX2.2, NKX2B	NK2 homeobox 2
NKX2-3	159296	CSX3, NK2.3, NKX2.3, NKX2C, NKX4-3	NK2 homeobox 3
NKX2-5	1482	CHNG5, CSX, CSX1, HLHS2, NKX2.5, NKX2E, NKX4-1, VSD3	NK2 homeobox 5
NKX3-1	4824	BAPX2, NKX3, NKX3.1, NKX3A	NK3 homeobox 1
NOTCH3	4854	CADASIL, CASIL	notch 3
NPAS1	4861	MOP5, PASD5, bHLHe11	neuronal PAS domain protein 1
NPAS2	4862	MOP4, PASD4, bHLHe9	neuronal PAS domain protein 2
NPAS3	64067	MOP6, PASD6, bHLHe12	neuronal PAS domain protein 3
NPM1	4869	B23, NPM	nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NR0B1	190	AHC, AHCH, AHX, DAX-1, DAX1, DSS, GTD, HHG, NROB1, SRXY2	nuclear receptor subfamily 0, group B, member 1
NR0B2	8431	SHP, SHP1	nuclear receptor subfamily 0, group B, member 2
NR1D1	9572	EAR1, THRA1, THRAL, ear-1, hRev	nuclear receptor subfamily 1, group D, member 1
NR1H2	7376	LXR-b, LXRB, NER, NER-I, RIP15, UNR	nuclear receptor subfamily 1, group H, member 2
NR1H3	10062	LXR-a, LXRA, RLD-1	nuclear receptor subfamily 1, group H, member 3
NR1H4	9971	BAR, FXR, HRR-1, HRR1, RIP14	nuclear receptor subfamily 1, group H, member 4
NR1I2	8856	BXR, ONR1, PAR, PAR1, PAR2, PARq, PRR, PXR, SAR, SXR	nuclear receptor subfamily 1, group I, member 2
NR1I3	9970	CAR, CAR1, MB67	nuclear receptor subfamily 1, group I, member 3
NR2C2	7182	TAK1, TR2R1, TR4, hTAK1	nuclear receptor subfamily 2, group C, member 2
NR2E3	10002	ESCS, PNR, RNR, RP37, rd7	nuclear receptor subfamily 2, group E, member 3
NR2F1	7025	COUP-TFI, EAR-3, EAR3, ERBAL3, NR2F2, SVP44, TCFCOUP1, TFCOUP1	nuclear receptor subfamily 2, group F, member 1
NR2F2	7026	ARP1, COUPTFB, COUPTFII, NF-E3, NR2F1, SVP40, TFCOUP2	nuclear receptor subfamily 2, group F, member 2
NR2F6	2063	EAR-2, EAR2, ERBAL2	nuclear receptor subfamily 2, group F, member 6
NR3C1	2908	GCCR, GCR, GR, GRL	nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
NR3C2	4306	MCR, MLR, MR, NR3C2VIT	nuclear receptor subfamily 3, group C, member 2
NR4A1	3164	GFRP1, HMR, N10, NAK-1, NGFIB, NP10, NUR77, TR3	nuclear receptor subfamily 4, group A, member 1
NR4A2	4929	HZF-3, NOT, NURR1, RNR1, TINUR	nuclear receptor subfamily 4, group A, member 2
NR4A3	8013	CHN, CSMF, MINOR, NOR1, TEC	nuclear receptor subfamily 4, group A, member 3
NR5A1	2516	AD4BP, ELP, FTZ1, FTZF1, POF7, SF-1, SF1, SPGF8, SRXY3	nuclear receptor subfamily 5, group A, member 1
NR5A2	2494	B1F, B1F2, CPF, FTF, FTZ-F1, FTZ-F1beta, LRH-1, LRH1, hB1F-2	nuclear receptor subfamily 5, group A, member 2
NRF1	4899	ALPHA-PAL, Nrf1	nuclear respiratory factor 1
NRIP1	8204	RIP140	nuclear receptor interacting protein 1
NRL	4901	D14S46E, NRL-MAF, RP27	neural retina leucine zipper
NSD1	64324	ARA267, KMT3B, SOTOS, SOTOS1, STO	nuclear receptor binding SET domain protein 1
NUPR1	26471	COM1, P8	nuclear protein, transcriptional regulator, 1
ONECUT1	3175	HNF-6, HNF6, HNF6A	one cut homeobox 1
ONECUT2	9480	OC-2, OC2	one cut homeobox 2
OTX1	5013	0	orthodenticle homeobox 1
OTX2	5015	CPHD6, MCOPS5	orthodenticle homeobox 2
PA2G4	5036	EBP1, HG4-1, p38-2G4	proliferation-associated 2G4, 38kDa
PARP1	142	ADPRT, ADPRT 1, ADPRT1, ARTD1, PARP, PARP-1, PPOL, pADPRT-1	poly (ADP-ribose) polymerase 1
PAWR	5074	PAR4, Par-4	PRKC, apoptosis, WT1, regulator
PAX1	5075	HUP48	paired box 1
PAX2	5076	PAPRS	paired box 2
PAX3	5077	CDHS, HUP2, WS1, WS3	paired box 3
PAX4	5078	KPD, MODY9, Pax4	paired box 4
PAX5	5079	BSAP	paired box 5
PAX6	5080	AN, AN2, D11S812E, MGDA, WAGR	paired box 6
PAX8	7849	0	paired box 8
PBX1	5087	0	pre-B-cell leukemia homeobox 1
PBX2	5089	G17, HOX12, PBX2MHC	pre-B-cell leukemia homeobox 2
PCGF2	7703	MEL-18, RNF110, ZNF144	polycomb group ring finger 2
PDCD11	22984	ALG-4, ALG4, NFBP, RRP5	programmed cell death 11
PDX1	3651	GSF, IDX-1, IPF1, IUF1, MODY4, PDX-1, STF-1	pancreatic and duodenal homeobox 1
PER1	5187	PER, RIGUI, hPER	period circadian clock 1
PER2	8864	FASPS	period circadian clock 2
PGR	5241	NR3C3, PR	progesterone receptor
PHB2	11331	BAP, BCAP37, Bap37, PNAS-141, REA, p22	prohibitin 2
PHF10	55274	BAF45A, XAP135	PHD finger protein 10
PHOX2A	401	ARIX, CFEOM2, FEOM2, NCAM2, PMX2A	paired-like homeobox 2a
PHOX2B	8929	NBLST2, NBPhox, PMX2B	paired-like homeobox 2b
PIAS1	8554	DDXBP1, GBP, GU/RH-II, ZMIZ3	protein inhibitor of activated STAT, 1
PIAS2	9063	ARIP3, DIP, MIZ, MIZ1, PIASX, PIASX-ALPHA, PIASX-BETA, SIZ2, ZMIZ4	protein inhibitor of activated STAT, 2
PIAS3	10401	ZMIZ5	protein inhibitor of activated STAT, 3
PIAS4	51588	PIASY, Piasg, ZMIZ6	protein inhibitor of activated STAT, 4
PIR	8544	0	pirin (iron-binding nuclear protein)
PITX1	5307	BFT, CCF, LBNBG, POTX, PTX1	paired-like homeodomain 1
PITX2	5308	ARP1, Brx1, IDG2, IGDS, IGDS2, IHG2, IRID2, Otlx2, PTX2, RGS, RIEG, RIEG1, RS	paired-like homeodomain 2
PITX3	5309	CTPP4, PTX3	paired-like homeodomain 3
PKNOX1	5316	PREP1, pkonx1c	PBX/knotted 1 homeobox 1
PLAG1	5324	PSA, SGPA, ZNF912	pleiomorphic adenoma gene 1
PLAGL1	5325	LOT1, ZAC, ZAC1	pleiomorphic adenoma gene-like 1
PLAGL2	5326	ZNF900	pleiomorphic adenoma gene-like 2
PML	5371	MYL, PP8675, RNF71, TRIM19	promyelocytic leukemia
POLR1A	25885	A190, RPA1, RPA194, RPO1-4, RPO14	polymerase (RNA) I polypeptide A, 194kDa
POU1F1	5449	CPHD1, GHF-1, PIT1, POU1F1a, Pit-1	POU class 1 homeobox 1
POU2AF1	5450	BOB1, OBF-1, OBF1, OCAB	POU class 2 associating factor 1
POU2F1	5451	OCT1, OTF1, oct-1B	POU class 2 homeobox 1
POU2F2	5452	OCT2, OTF2, Oct-2	POU class 2 homeobox 2
POU2F3	25833	Epoc-1, OCT-11, OCT11, OTF-11, PLA-1, PLA1, Skn-1a	POU class 2 homeobox 3
POU3F1	5453	OCT6, OTF6, SCIP	POU class 3 homeobox 1
POU3F2	5454	BRN2, N-Oct3, OCT7, OTF-7, OTF7, POUF3, brn-2, oct-7	POU class 3 homeobox 2
POU3F4	5456	BRAIN-4, BRN-4, BRN4, DFN3, DFNX2, OCT-9, OTF-9, OTF9	POU class 3 homeobox 4
POU4F1	5457	BRN3A, Oct-T1, RDC-1, brn-3A	POU class 4 homeobox 1
POU4F2	5458	BRN3.2, BRN3B, Brn-3b	POU class 4 homeobox 2
POU5F1	5460	OCT3, OCT4, OTF-3, OTF3, OTF4, Oct-3, Oct-4	POU class 5 homeobox 1
PPARA	5465	NR1C1, PPAR, PPARalpha, hPPAR, Ppara	peroxisome proliferator-activated receptor alpha
PPARD	5467	FAAR, NR1C2, NUC1, NUCI, NUCII, PPARB	peroxisome proliferator-activated receptor delta
PPARG	5468	CIMT1, GLM1, NR1C3, PPARG1, PPARG2, PPARgamma	peroxisome proliferator-activated receptor gamma
PPARGC1A	10891	LEM6, PGC-1(alpha), PGC-1v, PGC1, PGC1A, PPARGC1	peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
PRDM1	639	BLIMP1, PRDI-BF1	PR domain containing 1, with ZNF domain
PRDM14	63978	PFM11	PR domain containing 14
PREB	10113	SEC12	prolactin regulatory element binding
PROX1	5629	0	prospero homeobox 1
PTF1A	256297	PTF1-p48, bHLHa29	pancreas specific transcription factor, 1a
PTMA	5757	TMSA	prothymosin, alpha
PTTG1	9232	EAP1, HPTTG, PTTG, TUTR1	pituitary tumor-transforming 1
PURA	5813	PUR-ALPHA, PUR1, PURALPHA	purine-rich element binding protein A
RAD51	5888	BRCC5, HRAD51, HsRad51, HsT16930, MRMV2, RAD51A, RECA	RAD51 homolog (S. cerevisiae)
RARA	5914	NR1B1, RAR, Rara	retinoic acid receptor, alpha
RARB	5915	HAP, NR1B2, RRB2	retinoic acid receptor, beta
RARG	5916	NR1B3, RARC, Rarg	retinoic acid receptor, gamma
RB1	5925	OSRC, RB, p105-Rb, pRb, pp110	retinoblastoma 1
RB1CC1	9821	CC1, FIP200	RB1-inducible coiled-coil 1
RBBP7	5931	RbAp46	retinoblastoma binding protein 7
RBL1	5933	CP107, PRB1, p107	retinoblastoma-like 1 (p107)
RBL2	5934	P130, Rb2	retinoblastoma-like 2 (p130)
RBMX	27316	HNRPG, RBMXP1, RBMXRT, RNMX, hnRNP-G	RNA binding motif protein, X-linked
RBPJ	3516	AOS3, CBF1, IGKJRB, IGKJRB1, KBF2, RBP-J, RBPJK, RBPSUH, SUH, csl	recombination signal binding protein for immunoglobulin kappa J region
REL	5966	C-Rel, c-rel, Rel	v-rel reticuloendotheliosis viral oncogene homolog (avian)
RELA	5970	NFKB3, p65, Rela	v-rel reticuloendotheliosis viral oncogene homolog A (avian)
RELB	5971	I-REL, IREL, REL-B	v-rel reticuloendotheliosis viral oncogene homolog B
REST	5978	NRSF, XBR	RE1-silencing transcription factor
RFWD2	64326	COP1, RNF200	ring finger and WD repeat domain 2, E3 ubiquitin protein ligase
RFX1	5989	EFC, RFX	regulatory factor X, 1 (influences HLA class II expression)
RFX2	5990	0	regulatory factor X, 2 (influences HLA class II expression)
RFX3	5991	bA32F11.1	regulatory factor X, 3 (influences HLA class II expression)
RFX5	5993	0	regulatory factor X, 5 (influences HLA class II expression)
RFXANK	8625	ANKRA1, BLS, F14150_1, RFX-B	regulatory factor X-associated ankyrin-containing protein
RFXAP	5994	0	regulatory factor X-associated protein
RNF14	9604	ARA54, HFB30, TRIAD2	ring finger protein 14
RORA	6095	NR1F1, ROR1, ROR2, ROR3, RZR-ALPHA, RZRA	RAR-related orphan receptor A
RORC	6097	NR1F3, RORG, RZR-GAMMA, RZRG, TOR	RAR-related orphan receptor C
RREB1	6239	FINB, HNT, LZ321, RREB-1, Zep-1	ras responsive element binding protein 1
RUNX1	861	AML1, AML1-EVI-1, AMLCR1, CBFA2, EVI-1, PEBP2aB	runt-related transcription factor 1
RUNX1T1	862	AML1T1, CBFA2T1, CDR, ETO, MTG8, ZMYND2	runt-related transcription factor 1 translocated to, 1 (cyclin D-related)
RUNX2	860	AML3, CBFA1, CCD, CCD1, CLCD, OSF-2, OSF2, PEA2aA, PEBP2A1, PEBP2A2, PEBP2aA, PEBP2aA1	runt-related transcription factor 2
RUNX3	864	AML2, CBFA3, PEBP2aC	runt-related transcription factor 3
RUVBL1	8607	ECP54, INO80H, NMP238, PONTIN, Pontin52, RVB1, TIH1, TIP49, TIP49A	RuvB-like 1 (E. coli)
RXRA	6256	NR2B1	retinoid X receptor, alpha
SALL3	27164	ZNF796	sal-like 3 (Drosophila)
SALL4	57167	DRRS, HSAL4, ZNF797, dJ1112F19.1	sal-like 4 (Drosophila)
SATB1	6304	0	SATB homeobox 1
SATB2	23314	0	SATB homeobox 2
SCAND1	51282	RAZ1, SDP1	SCAN domain containing 1
SEC14L2	23541	C22orf6, SPF, TAP, TAP1	SEC14-like 2 (S. cerevisiae)
SERTAD1	29950	SEI1, TRIP-Br1	SERTA domain containing 1
SETBP1	26040	SEB	SET binding protein 1
SF1	7536	BBP, D11S636, MBBP, ZCCHC25, ZFM1, ZNF162	splicing factor 1
SFPQ	6421	POMP100, PSF	splicing factor proline/glutamine-rich
SHOX	6473	GCFX, PHOG, SHOXY, SS	short stature homeobox
SIM2	6493	HMC13F06, HMC29C01, SIM, bHLHe15	single-minded homolog 2 (Drosophila)
SIN3A	25942	0	SIN3 transcription regulator homolog A (yeast)
SIRT1	23411	SIR2L1	sirtuin 1
SIRT2	22933	SIR2, SIR2L, SIR2L2	sirtuin 2
SIX1	6495	BOS3, DFNA23, TIP39	SIX homeobox 1
SKI	6497	SGS, SKV	v-ski sarcoma viral oncogene homolog (avian)
SKIL	6498	SNO, SnoA, SnoI, SnoN	SKI-like oncogene
SLA2	84174	C20orf156, MARS, SLAP-2, SLAP2	Src-like-adaptor 2
SLC2A4RG	56731	GEF, HDBP-1, HDBP1, Si-1-2, Si-1-2-19	SLC2A4 regulator
SMAD1	4086	BSP-1, BSP1, JV4-1, JV41, MADH1, MADR1	SMAD family member 1
SMAD2	4087	JV18, JV18-1, MADH2, MADR2, hMAD-2, hSMAD2	SMAD family member 2
SMAD3	4088	HSPC193, HsT17436, JV15-2, LDS1C, LDS3, MADH3	SMAD family member 3
SMAD4	4089	DPC4, JIP, MADH4, MYHRS	SMAD family member 4
SMAD7	4092	CRCS3, MADH7, MADH8	SMAD family member 7
SMARCA1	6594	ISWI, NURF140, SNF2L, SNF2L1, SNF2LB, SNF2LT, SWI, SWI2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
SMARCA4	6597	BAF190, BAF190A, BRG1, MRD16, RTPS2, SNF2, SNF2L4, SNF2LB, SWI2, hSNF2b, Brg1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
SMARCB1	6598	BAF47, INI1, MRD15, RDT, RTPS1, SNF5, SNF5L1, Sfh1p, Snr1, hSNFS, Ini1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
SMURF2	64750	0	SMAD specific E3 ubiquitin protein ligase 2
SNAI1	6615	SLUGH2, SNA, SNAH, SNAIL, SNAIL1, dJ710H13.1	snail homolog 1 (Drosophila)
SNAI2	6591	SLUG, SLUGH1, SNAIL2, WS2D	snail homolog 2 (Drosophila)
SND1	27044	TDRD11, p100	staphylococcal nuclease and tudor domain containing 1
SNIP1	79753	PMRED	Smad nuclear interacting protein 1
SNW1	22938	Bx42, NCOA-62, PRPF45, Prp45, SKIIP, SKIP	SNW domain containing 1
SOX10	6663	DOM, PCWH, WS2E, WS4, WS4C	SRY (sex determining region Y)-box 10
SOX11	6664	0	SRY (sex determining region Y)-box 11
SOX17	64321	VUR3	SRY (sex determining region Y)-box 17
SOX2	6657	ANOP3, MCOPS3	SRY (sex determining region Y)-box 2
SOX3	6658	GHDX, MRGH, PHP, PHPX, SOXB	SRY (sex determining region Y)-box 3
SOX4	6659	EVI16	SRY (sex determining region Y)-box 4
SOX5	6660	L-SOX5	SRY (sex determining region Y)-box 5
SOX6	55553	HSSOX6, SOXD	SRY (sex determining region Y)-box 6
SOX9	6662	CMD1, CMPD1, SRA1	SRY (sex determining region Y)-box 9
SP1	6667	Sp1, LOC144467	Sp1 transcription factor
SP100	6672	lysp100b	SP100 nuclear antigen
SP2	6668	0	Sp2 transcription factor
SP3	6670	SPR2	Sp3 transcription factor
SP4	6671	HF1B, SPR-1	Sp4 transcription factor
SP7	121340	OI11, OI12, OSX, osterix	Sp7 transcription factor
SPDEF	25803	PDEF, RP11-375E1__A.3, bA375E1.3	SAM pointed domain containing ets transcription factor
SPEN	23013	HIAA0929, MINT, RBM15C, SHARP	spen homolog, transcriptional regulator (Drosophila)
SPI1	6688	OF, PU.1, SFPI1, SPI-1, SPI-A, Sfpi1	spleen focus forming virus (SFFV) proviral integration oncogene spi1
SPIB	6689	SPI-B	Spi-B transcription factor (Spi-1/PU.1 related)
SPIC	121599	SPI-C	Spi-C transcription factor (Spi-1/PU.1 related)
SRCAP	10847	DOMO1, EAF1, FLHS, SWR1	Snf2-related CREBBP activator protein
SREBF1	6720	SREBP-1c, SREBP1, bHLHd1	sterol regulatory element binding transcription factor 1
SREBF2	6721	SREBP2, bHLHd2	sterol regulatory element binding transcription factor 2
SRF	6722	MCM1	serum response factor (c-fos serum response element-binding transcription factor)
SRSF1	6426	ASF, SF2, SF2p33, SFRS1, SRp30a	serine/arginine-rich splicing factor 1
SRY	6736	SRXX1, SRXY1, TDF, TDY	sex determining region Y
SSB	6741	LARP3, La	Sjogren syndrome antigen B (autoantigen La)
SSX2	6757	CT5.2a, HD21, HOM-MEL-40, SSX	synovial sarcoma, X breakpoint 2
STAT1	6772	CANDF7, ISGF-3, STAT91, Stat1	signal transducer and activator of transcription 1, 91kDa
STAT2	6773	ISGF-3, P113, STAT113	signal transducer and activator of transcription 2, 113kDa
STAT3	6774	APRF, HIES, Stat3	signal transducer and activator of transcription 3 (acute-phase response factor)
STAT4	6775	SLEB11	signal transducer and activator of transcription 4
STAT5A	6776	MGF, STAT5, Stat5a	signal transducer and activator of transcription 5A
STAT5B	6777	STAT5	signal transducer and activator of transcription 5B
STAT6	6778	D12S1644, IL-4-STAT, STAT6B, STAT6C, Stat6	signal transducer and activator of transcription 6, interleukin-4 induced
SUGP1	57794	F23858, RBP, SF4	SURP and G patch domain containing 1
SUPT3H	8464	SPT3, SPT3L	suppressor of Ty 3 homolog (S. cerevisiae)
TAF1	6872	BA2R, CCG1, CCGS, DYT3, DYT3/TAF1, KAT4, N-TAF1, NSCL2, OF, P250, TAF2A, TAFII250, XDP	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa
TAF12	6883	TAF2J, TAFII20	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
TAF4	6874	TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135	TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
TAF5	6877	TAF2D, TAFII100	TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa
TAL1	6886	SCL, TCL5, bHLHa17, tal-1	T-cell acute lymphocytic leukemia 1
TBL1X	6907	EBI, SMAP55, TBL1	transducin (beta)-like 1X-linked
TBP	6908	GTF2D, GTF2D1, HDL4, SCA17, TFIID	TATA box binding protein
TBPL1	9519	MGC:8389, MGC:9620, STUD, TLF, TLP, TRF2	TBP-like 1
TBR1	10716	TBR-1, TES-56	T-box, brain, 1
TBX2	6909	0	T-box 2
TBX20	57057	ASD4	T-box 20
TBX21	30009	T-PET, T-bet, TBET, TBLYM	T-box 21
TBX3	6926	TBX3-ISO, UMS, XHL	T-box 3
TBX5	6910	HOS	T-box 5
TCEAL1	9338	SIIR, p21, pp21	transcription elongation factor A (SII)-like 1
TCF12	6938	HEB, HTF4, HsT17266, bHLHb20	transcription factor 12
TCF19	6941	SC1, SC1-1	transcription factor 19
TCF21	6943	POD1, bHLHa23	transcription factor 21
TCF3	6929	E2A, E47, ITF1, TCF-3, VDIR, bHLHb21	transcription factor 3
TCF4	6925	E2-2, ITF-2, ITF2, PTHS, SEF-2, SEF2, SEF2-1, SEF2-1A, SEF2-1B, TCF-4, bHLHb19	transcription factor 4
TCF7	6932	TCF-1	transcription factor 7 (T-cell specific, HMG-box)
TCF7L2	6934	TCF-4, TCF4	transcription factor 7-like 2 (T-cell specific, HMG-box)
TCFL5	10732	CHA, E2BP-1, Figlb, bHLHe82	transcription factor-like 5 (basic helix-loop-helix)
TEAD1	7003	AA, NTEF-1, REF1, TCF-13, TCF13, TEAD-1, TEF-1	TEA domain family member 1 (SV40 transcriptional enhancer factor)
TEAD4	7004	EFTR-2, RTEF1, TCF13L1, TEF-3, TEF3, TEFR-1, hRTEF-1B	TEA domain family member 4
TEF	7008	0	thyrotrophic embryonic factor
TFAP2A	7020	AP-2, AP-2alpha, AP2TF, BOFS, TFAP2	transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
TFAP2B	7021	AP-2B, AP2-B	transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
TFAP2C	7022	AP2-GAMMA, ERF1, TFAP2G, hAP-2g, Ap-2gamma, AP-2gamma	transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)
TFAP4	7023	AP-4, bHLHc41	transcription factor AP-4 (activating enhancer binding protein 4)
TFCP2	7024	LBP1C, LSF, LSF1D, SEF, TFCP2C	transcription factor CP2
TFCP2L1	29842	CRTR1, LBP-9, LBP9	transcription factor CP2-like 1
TFDP1	7027	DP1, DRTF1, Dp-1, DP-1	transcription factor Dp-1
TFDP3	51270	CT30, DP4, HCA661	transcription factor Dp family, member 3
TFEB	7942	ALPHATFEB, BHLHE35, TCFEB	transcription factor EB
TGIF1	7050	HPE4, TGIF	TGFB-induced factor homeobox 1
THRA	7067	AR7, CHNG6, EAR7, ERB-T-1, ERBA, ERBA1, NR1A1, THRA1, THRA2, c-ERBA-1	thyroid hormone receptor, alpha
THRB	7068	C-ERBA-2, C-ERBA-BETA, ERBA2, GRTH, NR1A2, PRTH, THR1, THRB1, THRB2	thyroid hormone receptor, beta
TIAL1	7073	TCBP, TIAR	TIA1 cytotoxic granule-associated RNA binding protein-like 1
TLX1	3195	HOX11, TCL3	T-cell leukemia homeobox 1
TNFAIP3	7128	A20, OTUD7C, TNFA1P2	tumor necrosis factor, alpha-induced protein 3
TOB1	10140	APRO6, PIG49, TOB, TROB, TROB1	transducer of ERBB2, 1
TP53	7157	BCC7, LFS1, P53, TRP53, Trp53	tumor protein p53
TP53BP1	7158	53BP1, p202	tumor protein p53 binding protein 1
TP63	8626	AIS, B(p51A), B(p51B), EEC3, KET, LMS, NBP, OFC8, RHS, SHFM4, TP53CP, TP53L, TP73L, p40, p51, p53CP, p63, p73H, p73L	tumor protein p63
TP73	7161	P73	tumor protein p73
TRERF1	55809	BCAR2, HSA277276, RAPA, RP1-139D8.5, TReP-132, dJ139D8.5	transcriptional regulating factor 1
TRIB3	57761	C20orf97, NIPK, SINK, SKIP3, TRB3	tribbles homolog 3 (Drosophila)
TRIM16	10626	EBBP	tripartite motif containing 16
TRIM24	8805	PTC6, RNF82, TF1A, TIF1, TIF1A, TIF1ALPHA, hTIF1	tripartite motif containing 24
TRIM28	10155	KAP1, RNF96, TF1B, TIF1B	tripartite motif containing 28
TRPS1	7227	GC79, LGCR	trichorhinophalangeal syndrome I
TRRAP	8295	PAF350/400, PAF400, STAF40, TR-AP, Tra1	transformation/transcription domain-associated protein
TSC22D1	8848	Ptg-2, TGFB1I4, TSC22	TSC22 domain family, member 1
TSC22D3	1831	DIP, DSIPI, GILZ, TSC-22R, hDIP	TSC22 domain family, member 3
TSG101	7251	TSG10, VPS23	tumor susceptibility gene 101
TTF2	8458	HuF2	transcription termination factor, RNA polymerase II
TWIST1	7291	ACS3, BPES2, BPES3, CRS1, SCS, TWIST, bHLHa38	twist basic helix-loop-helix transcription factor 1
TWIST2	117581	DERMO1, FFDD3, SETLSS, bHLHa39	twist basic helix-loop-helix transcription factor 2
UBP1	7342	LBP-1B, LBP-1a, LBP1A, LBP1B	upstream binding protein 1 (LBP-1a)
UBTF	7343	NOR-90, UBF, UBF-1, UBF1	upstream binding transcription factor, RNA polymerase I
UHRF1	29128	ICBP90, Np95, RNF106, hNP95, hUHRF1	ubiquitin-like with PHD and ring finger domains 1
URI1	8725	C19orf2, NNX3, PPP1R19, RMP, URI	URI1, prefoldin-like chaperone
USF1	7391	FCHL, FCHL1, HYPLIP1, MLTF, MLTFI, UEF, bHLHb11, Usf1	upstream transcription factor 1
USF2	7392	FIP, bHLHb12, Usf2	upstream transcription factor 2, c-fos interacting
UTF1	8433	0	undifferentiated embryonic cell transcription factor 1
VDR	7421	NR1I1	vitamin D (1,25- dihydroxyvitamin D3) receptor
VEZF1	7716	DB1, ZNF161	vascular endothelial zinc finger 1
VHL	7428	HRCA1, RCA1, VHL1, pVHL	von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
WHSC1	7468	MMSET, NSD2, REIIBP, TRX5, WHS	Wolf-Hirschhorn syndrome candidate 1
WT1	7490	AWT1, EWS-WT1, GUD, NPHS4, WAGR, WIT-2, WT33	Wilms tumor 1
WWP1	11059	AIP5, Tiul1, hSDRP1	WW domain containing E3 ubiquitin protein ligase 1
WWTR1	25937	TAZ	WW domain containing transcription regulator 1
XBP1	7494	TREB5, XBP-1, XBP2	X-box binding protein 1
XPC	7508	RAD4, XP3, XPCC	xeroderma pigmentosum, complementation group C
XRCC5	7520	KARP-1, KARP1, KU80, KUB2, Ku86, NFIV	X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
XRCC6	2547	CTC75, CTCBF, G22P1, KU70, ML8, TLAA	X-ray repair complementing defective repair in Chinese hamster cells 6
YBX1	4904	BP-8, CSDA2, CSDB, DBPB, MDR-NF1, NSEP-1, NSEP1, YB-1, YB1	Y box binding protein 1
YY1	7528	DELTA, INO80S, NF-E1, UCRBP, YIN-YANG-1	YY1 transcription factor
ZBTB14	7541	ZF5, ZFP-161, ZFP-5, ZFP161, ZNF478	zinc finger and BTB domain containing 14
ZBTB16	7704	PLZF, ZNF145	zinc finger and BTB domain containing 16
ZBTB17	7709	MIZ-1, ZNF151, ZNF60, pHZ-67	zinc finger and BTB domain containing 17
ZBTB2	57621	ZNF437	zinc finger and BTB domain containing 2
ZBTB5	9925	0	zinc finger and BTB domain containing 5
ZBTB7A	51341	FBI-1, FBI1, LRF, ZBTB7, ZNF857A, pokemon	zinc finger and BTB domain containing 7A
ZEB1	6935	AREB6, BZP, DELTAEF1, FECD6, NIL2A, PPCD3, TCF8, ZFHEP, ZFHX1A	zinc finger E-box binding homeobox 1
ZEB2	9839	HSPC082, SIP-1, SIP1, SMADIP1, ZFHX1B	zinc finger E-box binding homeobox 2
ZFHX3	463	ATBF1, ATBT, ZNF927	zinc finger homeobox 3
ZFP36	7538	G0S24, GOS24, NUP475, RNF162A, TIS11, TTP, zfp-36	ZFP36 ring finger protein
ZFP36L1	677	BRF1, Berg36, ERF-1, ERF1, RNF162B, TIS11B, cMG1	ZFP36 ring finger protein-like 1
ZHX2	22882	AFR1, RAF	zinc fingers and homeoboxes 2
ZHX3	23051	TIX1	zinc fingers and homeoboxes 3
ZIC1	7545	ZIC, ZNF201	Zic family member 1
ZIC2	7546	HPE5	Zic family member 2
ZMYND11	10771	BRAM1, BS69	zinc finger, MYND-type containing 11
ZNF143	7702	SBF, STAF, pHZ-1, Znf143	zinc finger protein 143
ZNF148	7707	BERF-1, BFCOL1, HT-BETA, ZBP-89, ZFP148, pHZ-52	zinc finger protein 148
ZNF160	90338	F11, HKr18, HZF5, KR18	zinc finger protein 160
ZNF175	7728	OTK18	zinc finger protein 175
ZNF202	7753	ZKSCAN10, ZSCAN42	zinc finger protein 202
ZNF217	7764	ZABC1	zinc finger protein 217
ZNF224	7767	BMZF-2, BMZF2, KOX22, ZNF255, ZNF27	zinc finger protein 224
ZNF239	8187	HOK-2, MOK2	zinc finger protein 239
ZNF24	7572	KOX17, RSG-A, ZNF191, ZSCAN3, Zfp191	zinc finger protein 24
ZNF267	10308	HZF2	zinc finger protein 267
ZNF300	91975	0	zinc finger protein 300
ZNF350	59348	ZBRK1, ZFQR	zinc finger protein 350
ZNF382	84911	KS1	zinc finger protein 382
ZNF383	163087	0	zinc finger protein 383
ZNF410	57862	APA-1, APA1	zinc finger protein 410
ZNF444	55311	EZF-2, EZF2, ZSCAN17	zinc finger protein 444
ZNF76	7629	D6S229E, ZNF523, Zfp523	zinc finger protein 76
ZNRD1	30834	HTEX-6, Rpa12, TEX6, hZR14, tctex-6	zinc ribbon domain containing 1
ZSCAN21	7589	NY-REN-21, ZNF38, Zipro1	zinc finger and SCAN domain containing 21